CSS Analytical has all the spare parts you will need to keep your HP/Agilent GCMS, LCMS systems (GCs and LCs too !) running for five to ten more years.
Data System Upgrades for your HP / Agilent 5970, 5971, 5972 and 5988 and 5989 Mass Spectrometer Systems. CSS has developed our own proprietary upgrade kit which will allow all older HP Mass Spectrometer systems (and standalone GC systems too !) to be recognized and operated by modern Agilent Chemstation Software and Microsoft Windows 7 (XP still available).
It is now possible to take full advantage of easy, repeatable nano spray using the the Agilent Chip product with Thermo LTQ, Velos, Orbitrap, Q Exactive or Vantage triple quadrupole mass spectrometers. An Agilent HPLC-Chip Cube MS Interface (G4240A) is modified by CSS Analytical Co Inc. and with a custom built interface, it easily attaches to any Thermo Scientific mass spectrometer with an IonMax source housing. The Agilent Chip (various part numbers) is a credit card sized, disposable product, which offers an enrichment column, an analytical column, a column switching valve and an electrospray (ESI) emitter – all on one micro-fabricated chip.

CSS Analytical Company, Inc. has been doing business as CSS Company since 1990, and incorporated as a Kansas Corporation in 1994.
Since inception CSS Analytical has specialized in being "Your Upgrade Solution Provider" focusing on upgrade products for Hewlett-Packard, HP & Agilent Technologies GCMS, LCMS, GC and LC systems.
Currently CSS Analytical has branched out in the LCMS field by offering an efficient and budget conscience nano flow gradient LC system using syringe pumps for 2D chromatographic introduction to electrospray mass spectrometry. An interface for chip based nano spray introduction to the Thermo LTQ mass spectrometer line. And finally, a Hydrogen-Deuterium Exchange system for protein analysis.
The main office for CSS Analytical is located in Shawnee Kansas, a suburb of Kansas City Missouri and our 3000 sq. ft. laboratory is located 2 miles away from the office in a local light industrial park.
Please ship all UPS and FedEx Packages to our Lab at: 6924 Martindale , Shawnee KS 66218.
I started CSS Analytical Co Inc. in my home some 23+ years ago. I did most of the work, but my wife helped out with shipping, receiving, invoicing and bill paying. Our office (World Wide Headquarters) remains in my home so that my wife will continue to help with some of the administrative tasks. Our Laboratory is in an industrial park about 2 miles from the office. We have 3000 sq. ft. half of which is unfinished warehouse and half is finished office / laboratory. There we have two instrument labs, one electronics lab, and one miscellaneous laboratory in addition to an inventory area and machine shop.
Doing Business with CSS Analytical is very easy. We're a small company and very flexible. We've permanently retired our fax machine so we prefer that you send purchase orders by scanning them and emailing them. We really don't want to make any mistakes translating a ship to address for critical parts you need tomorrow.
Application for net terms (be advised that the approval process takes some time) is via our credit application form. We do not grant net terms to customers outside of the United States.
Visa / Master Card, PayPal and Wire Transfer are the preferred method of payment for all customers. There will be a $20 bank fee assessed for all wire transfers, contact us for wire transfer details.
It is now possible to take full advantage of easy, repeatable nano spray using the the Agilent Chip product with Thermo LTQ, Velos, Orbitrap, Q Exactive or Vantage triple quadrupole mass spectrometers. Our own CSS Analytical TrueSpray(c) Interface or an Agilent HPLC-Chip Cube MS Interface (G4240A) with our custom built interface easily attaches to any Thermo Scientific mass spectrometer with an IonMax (or newer) source housing.
The Agilent Chip (various part numbers) is a credit card sized, disposable product, which offers an enrichment column, an analytical column, a column switching valve and an electrospray (ESI) emitter – all on one micro-fabricated chip.
CSS Analytical modifies both the Agilent Chip Cube Box and the individual Chips. We sell both new and used pre-modified Chip Cube Boxes and also modified Chips for very reasonable prices. We service and support our modified cube boxes and in some cases will even warranty your Agilent Box if modified by us. We can also arange for short term rental or long term lease of the Agilnet hardware. Contact us for details.
This two-column chip is the key, it provides easy, repeatable, walk up – drop and spray nano ESI. Set up time is virtually non-existent. If your lab needs nano spray for its own obvious benefits on your LTQ then the CSS Analytical Nanospray Interface system is what you need. Click here to fill out our easy quotation form.
The system configuration looks like this: There are two HPLC pumping systems, which can be any brand but we think that Agilent 1100 and 1200 systems are awesome. A Micro-capillary pumping system will load the On-Chip trapping column. After the trapping column is loaded, the On-Chip valve switches and a Nano pumping system takes over to elute the analyte off the trapping column and onto the On-Chip analytical column. Loading is done at around 4.0 ul/min, the analytical gradient is run at 500 nl/min. Of course a PC and Chemstation will be required to run the Agilent modules. We can also help you connect your other HPLC systems, any brand and any software. We have been very resourceful in setting up the PC system for joint LTQ, Chip Delivery System and HPLC control. All parts of the system are interconnected with remote start cables so full sequencing is straight forward, making automated runs easy.
CSS Analytical Co Inc is not affiliated with Agilent Technologies in this project and product offerings. Agilent Technologies is not in any way connected with the CSS Analytical Chip Delivery System and does not sanction or warrant any modifications to its products.
Rapid Protein ID Chip: 43mm 300A C18 Analytical Column, 40 nl Trapping Column
Chip in spray mode, note the nano-spray bending slightly to the left
Chip in spray mode, note the nano-spray bending slightly to the left
Agilent Chip Cube on Thermo LTQ via CSS Analytical Interface hardware
Here is our Chip Delivery System (CDS) attached to a Thermo LTQ Velos with Orbitrap
LTQ in our own lab, with the CDS. We're up and running daily working on application notes
Here's a chromatograph of Digested IGG, eluted with a 10 minute gradient from 5% Acn to 70% Acn using the Harvard Syringe pumps and our gradient control program, on the Agilent Protein ID Chip. Rapid Protein ID, 43mm 300 A C18 chip w/40 nL traping column.
Check out our 2D HPLC pumping system. Micro flow loading and Nano flow eluting. We have written a visual basic executable to program a true gradient and control the solvent delivery. Three pumps, nano ported switching valve and software for under $25k. Contact us by email for details.
"Agilent" is a trademark of Agilent Technologies
"Thermo", "LTQ" and "Velos" are trademarks of Thermo Fisher Scientific Inc.

CSS Analytical handles a large volume of calls for support on HP and Agilent GC/MS systems. As support for these older systems is getting harder to find we continue to lead the field in support for these older HP GCs and Mass Spectrometers.
Parts for old out dated GC and GCMS instruments are getting more difficult to find. We have many parts in stock for the HP 5971, HP 5972, HP 5973, Agilent 5973, HP 5890 and Agilent 6890 instruments. We offer new, previously owned, and refurbished parts for many HP and Agilent mass spec systems.
The following is a partial list. If you need a board or part that is not listed please do not hesitate to e-mail us for availability. Prices include mandatory exchange of exact board. We have many more boards that may not be listed, contact us for the part you are looking for!
5971 5972 - Mass Spec boards, parts and assemblies.
5973 - Mass Spec boards, parts and assemblies.
5890 6890 - Gas Chromatograph boards, parts and assemblies.
5970 5988 5989 - Boards, parts and assemblies for older but still functioning instruments.
Smartcards - Mass Spec boards.
HPIB - Board that goes in the PC. There are several versions.
7673 - GC Autosampler boards, parts and assemblies.
Miscellaneous Parts - Miscellaneous boards, parts and assemblies.
SPECIAL NOTE FOR SPARE PARTS AND ELECTRONICS SALES: Parts are subject to availability. Prices subject to change without notice. Shipping/Handling charges for all parts to and from the customer are extra and are the responsibility of the buyer, and will be added to the invoice amount. Price includes exchange of your repairable identical board. Most customers must ship your board to us prior to release of shipment of the refurbished board. Add $1100 (in most cases) if you do not have a board to exchange. For first time customers we accept Visa/MC or Paypal.
Because the rarity of these parts and pieces, there is no return policy for refurbished boards. Every part is tested here before we ship. We do not provide boards for your troubleshooting needs.
If you wish, you can send us your suspected "dead" board and we will bench test it to confirm its "deadness", and then sell you a replacement. Our bench rate is $150 per hour for inspection and testing. Should you then wish to purchase a replacement board, we will normally forgo the bench test labor. Ask for details. Troubleshooting advice is available as outlined on the support pages.